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Did you know that your body, minus water, is 75% amino acids. Or that 95% of hormones are amino acids, and that 100% of all proteins are amino acids (see proteins)? And that amino acids govern and participate in every biochemical reaction in the body.
Amino Acids, Building Blocks of Life, Building Blocks of Healing. Cells are the smallest structures capable of basic life processes, such as taking in nutrients, expelling waste, and reproducing. A typical human cell consists of a plasma membrane that encloses various small, specialised organs and organelle inside a matrix called cytosol. Both the cell membrane and these small cellular organs consist of a combination of fats and proteins. Each of these organs fulfils a highly specialised function that determines the effectiveness of protein synthesis, energy production and - metabolism, and the exchange of nutrients and excretion of cellular waste. Further than this, amino acids bind to fats and carbohydrates to form enzymes, carrier proteins, receptors, hormones, and other structural proteins. The availability of the correct dosage of the appropriate amino-acids will thus greatly determine the permeability of the membranes to replenish nutrients and excrete waste, as well as the rate and effectiveness at which the intra-cellular organs function. A shortage of only one crucial amino acid will well enough disturb all of these processes and cellular components in such a way that it may lead to chronic fatigue, repeated infections, pain, joint stiffness, behavioural abnormalities, and lack of concentration and memory, to mention only a few. All enzymes and cell organs need a balanced feed of amino acids and other nutrients in certain proportions in order to function optimal.


Essential vs Non Essential.
Essential amino acids are considered to be the ones that we must ingest, while the non-essential have historically been believed to be the produced inside the body. In other words, it has been felt that we do not need to supplement our diet with non-essential amino acids.
 
This thinking does not hold up well  in the light of actual, clinical experience. When we are suffering from a moderate or severe chronic illness, we lose the ability to produce enough non-essential amino acids, and thus require supplementation. Problems with digestion will also require supplementation of "non-essential" amino acids. Most people have been told that if you eat a balanced diet, you'll get all the amino acids that your require. That is simply not true if you are significantly out of balance.
 
Recent studies has led to a third category within the amino acid classification system, namely, "Conditionally Essential". These amino acids are normally non-essential, but become essential in times of  biochemical stress.

Amino Acid Functions 
For the Biochemical Clinician understanding the amino acids according to their functions is most useful approach, and lead directly to recommendations for supplementation. This functional way of understanding and classifying amino acids builds on the "Glycemic Versus Ketogenic" system and greatly amplifies and clarifies amino acid functions.
Neurotransmitter Amino Acids:
Abnormalities in this group are widespread in their implications, and are seen in virtually all mental/emotional problems, primary brain problems (stroke, Alzheimer's disease, epilepsy), depression, anxiety, insomnia, poor concentration, memory problems, and mental exhaustion.
Aspartic acid, Asparagine, GABA, Glutaminic acid, Glutamine, Glycine, Phenylalanine, Taurine, Tryptophan, Tyrosine.
Branched Chain Amino Acids (BCAA):
This group contributes to protein synthesis. Surgery, deficiencies, are associated with injury, exercise, and muscle wasting. With Chronic Fatique Syndrome(CFS), one usually sees deficiencies in this group, which relates to easily fatiguability and post-exertional exhaustion.
Glutamine, Isoleucine, Leucine, Valine.
Sulfur-Containing Amino Acids:
Deficiencies in this group are associated with food allergies and chemical sensitivity.
Cystine/Cysteine, Methionine, Taurine.
Glycogenic Amino Acids:
Deficiencies in this group are associated with problems with sugar metabolism, diabetes mellitus, hypoglycemia, candidiasis, poor concentration, abnormalities in zinc and/or chromium levels, and fatique.
Alanine, Glutamine, Glycine, Serine, Threonine.
Urea Cycle Amino Acids:
Deficiencies can be associated with liver(see liver) disease, kidney disease, or strenuous exercise.
Arginine, Aspartic acid, Citrulline (minor amino acid), Ornithine (minor amino acid).
Connective Tissue Amino Acids:
Abnormalities within this group are associated with trauma, surgery, muscle wasting, and strenuous exercise.
Hydroxyproline (minor), Hydroxylysine (minor), Proline.
Amino Acids that give clues about Non-Amino Acid Defieceincies:
1. Phosphoserine (minor amino acid):
Elevated blood levels of Phosphoserine is predicative of a deficiency of pyridoxal-5-phosphate(P5P), a critical form of vit B-6. Without adequate blood levels of P5P, many amino acid reactions become impaired.
2. Histidine:
Abnormally high levels of histidine are associated with abnormally low levels of Zinc, and vice versa.
3. Taurine:
Abnormally low level of Taurine are suggestive of vit B12 deficiency, zinc deficiency, and vit A deficiency.
4. Arginine:
Deficiency indicates a weekened immune system.
5. Histidine:
Deficiency is associated with auto-immune disease.
6. Lysine:
Deficiency is suggestive of viral infection.
7. Taurine:
Defieciency is suggestive of generalized candidiasis.
8.Threonine:
Deficiency is associated with AIDS. 


After performing a Laboratory Investigation and Metabolic assessment, we can make an informed decision about the metabolic well-being of the individual and accordingly prepare a supplementation program that is personalized and aimed at rehabilitating those prosesses that we recognize not to be functioning optimally and thus ultimately improving the overall health of the individual. For the Biochemical Clinician understanding the amino acids according to their functions is most useful approach, and lead directly to recommendations for supplementation.


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